Publications

Name Publication Date ▼ Author Publication
Activating Hotspot L205R Mutation in PRKACA and Adrenal Cushing’s Syndrome
April 3, 2014
Yanan Cao, et al.
Science
Identification of genomic alterations in oesophageal squamous cell cancer
March 16, 2014
Yongmei Song, et al.
Nature
Genome sequencing of the high oil crop sesame provides insight into oil biosynthesis
February 27, 2014
Linhai Wang, et al.
Genome Biology
The Genome of the Clonal Raider Ant Cerapachys biroi
February 6, 2014
Peter R. Oxley, et al.
Current Biology
Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle
February 2, 2014
Songlin Chen, et al.
Nature Genetics
The locust genome provides insight into swarm formation and long-distance flight
January 14, 2014
Xianhui Wang, et al.
Nature Commuications
Whole exome sequencing of insulinoma reveals recurrent T372R mutations in YY1
December 10, 2013
Yanan Cao, et al.
Nature Communications
Minke whale genome and aquatic adaptation in cetaceans
November 24, 2013
Hyung-Soon Yim, et al.
Nature Genetics
Genomic insights into salt adaptation in a desert poplar
November 21, 2013
Tao Ma, et al.
Nature Communications
A large-scale screen for coding variants predisposing to psoriasis
November 10, 2013
Huayang Tang, et al.
Nature Genetics
A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity
October 20, 2013
Jianjian Qi, et al.
Nature Genetics
Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation
October 15, 2013
Guangwu Guo, et al.
Nature Genetics
The tiger genome and comparative analysis with lion and snow leopard genomes
September 17, 2013
Yun Sung Cho, et al.
Nature Communication
Genome sequencing of 161 Mycobacterium tuberculosis isolates from China identifies genes and intergenic regions associated with drug resistance
September 1, 2013
Hongtai Zhang, et al.
Nature Genetics
Genome analysis and signature discovery for diving and sensory properties of the endangered Chinese alligator
August 6, 2013
Wan QH, et al.
Cell Research
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
July 22, 2013
Keith R. Bradnam, et al.
GigaScience
Detection of Clinically Relevant Genetic Variants in Autism Spectrum Disorder by Whole-Genome Sequencing
July 11, 2013
Yong-hui Jiang, et al.
American Journal of Human Genetics
Whole genome sequencing identifies recurrent mutations in hepatocellular carcinoma
July 1, 2013
Zhengyan Kan, et al.
Genome Research
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
June 26, 2013
Ludovic Orlando, et al.
Nature
The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
June 9, 2013
Yinhua Huang, et al.
Nature Genetics
Draft genome sequence of the Tibetan antelope
May 14, 2013
Ri-Li Ge, et al.
Nature Communications
The draft genomes of soft-shell turtle and green sea turtle yield insights into the development and evolution of the turtle-specific body plan
April 28, 2013
Zhuo Wang, et al.
Nature Genetics
Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification
March 27, 2013
Xin Zhou, et al.
GigaScience
Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
March 24, 2013
Jizeng Jia, et al.
Nature
Draft genome of the wheat A-genome progenitor Triticum urartu
March 24, 2013
Hong-Qing Ling, et al.
Nature
Peregrine and saker falcon genome sequences provide insights into evolution of a predatory lifestyle
March 24, 2013
Xiangjiang Zhan, et al.
Nature Genetics
Genome of the Chinese tree shrew
February 5, 2013
Yu Fan, et al.
Nature Communications
Genomic Diversity and Evolution of the Head Crest in the Rock Pigeon
January 31, 2013
Michael D. Shapiro, et al.
Science
A Heterozygous Moth Genome Provides Insights Into Herbivory and Detoxification
January 13, 2013
Minsheng You, et al
Nature Genetics
Sequencing and Automated Whole-Genome Optical Mapping of the Genome of a Domestic Goat (Capra Hircus)
December 23, 2012
Yang Dong, et al.
Nature Biotechology
Whole-genome sequencing of giant pandas provides insights into demographic history and local adaptation
December 16, 2012
Shancen Zhao, et al.
Nature Genetics
The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions
November 25, 2012
Shaogui Guo, et al.
Nature Genetics
Analyses of pig genomes provide insight into porcine demography and evolution
November 15, 2012
Martien A.M. Groenen, et al.
Nature
The sequence and analysis of a Chinese pig genome
November 15, 2012
Xiaodong Fang, et al.
GigaScience
The genome of pear (Pyrus bretschneideri Rehd.)
November 13, 2012
Jun Wu, et al.
Genome Research
An integrated map of genetic variation from 1,092 human genomes
November 1, 2012
Gil A. McVean, et al.
Nature
Cytosine methylation and hydroxymethylation mark DNA for elimination in Oxytricha trifallax
October 17, 2012
John R. Bracht, et al.
Genome Biology
Differential DNA methylation in discrete developmental stages of the parasitic nematode Trichinella spiralis
October 17, 2012
Fei Gao, et al.
Genome Biology
A metagenome-wide association study of gut microbiota in type 2 diabetes
September 26, 2012
Junjie Qin, et al.
Nature Genetics
The draft genome of a diploid cotton Gossypium raimondii
August 26, 2012
Kunbo Wang, et al.
Nature Genetics
Iconic Darwin finch genome sequenced in Genome 10K international collaboration
August 17, 2012
Zhang, G, et al.
GigaScience
Genome-wide and Caste-Specific DNA Methylomes of the Ants Camponotus floridanus and Harpegnathos saltator
August 9, 2012
Roberto Bonasio, et al.
Cell
Exome sequencing identifies NMNAT1 mutations as a cause of Leber congenital amaurosis
July 29, 2012
Pei-Wen Chiang, et al.
Nature Genetics
The yak genome and adaptation to life at high altitude
July 5, 2012
Qiang Qiu, et al.
Nature Genetics
Distinct DNA methylomes of newborns and centenarians
June 11, 2012
Holger Heyn, et al.
Proceedings of the National Academy of Sciences
Comparative population genomics of maize domestication and improvement
June 3, 2012
Matthew B Hufford, et al.
Nature Genetics
Maize HapMap2 identifies extant variation from a genome in flux
June 3, 2012
Jer-Ming Chia, et al.
Nature Genetics
Genome-wide survey of recurrent HBV integration in hepatocellular carcinoma
May 27, 2012
Wing-Kin Sung, et al.
Nature Genetics
An atlas of DNA methylomes in porcine adipose and muscle tissues
May 22, 2012
Mingzhou Li, et al.
Nature Communications
An Abundance of Rare Functional Variants in 202 Drug Target Genes Sequenced in 14,002 People
May 17, 2012
Matthew R. Nelson, et al.
Science
Single-Cell Exome Sequencing Reveals Single-Nucleotide Mutation Characteristics of a Kidney Tumor
March 2, 2012
Xun Xu, et al.
Cell
Single-Cell Exome Sequencing and Monoclonal Evolution of a JAK2-Negative Myeloproliferative Neoplasm
March 2, 2012
Yong Hou, et al.
Cell
Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome
February 12, 2012
Zhiyu Peng, et al.
Nature Biotechnology
Toward interoperable bioscience data
January 27, 2012
Susanna-Assunta Sansone, et al.
Nature Genetics
Bisulfite Sequencing Reveals That Aspergillus flavus Holds a Hollow in DNA Methylation
January 20, 2012
Si-Yang Liu, et al.
PLoS ONE
Whole-genome sequence of Schistosoma haematobium
January 15, 2012
Neil D Young, et al.
Nature Genetics
Extensive X-linked adaptive evolution in central chimpanzees
December 22, 2011
Christina Hvilsoma, et al.
Proceedings of the National Academy of Sciences
Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes
December 11, 2011
Xun Xu, et al.
Nature Biotechnology
Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma
December 4, 2011
Guangwu Guo, et al.
Nature Genetics
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers.
November 7, 2011
Rajeev K Varshney, et al.
Nature Biotechnology
Ascaris suum draft genome.
October 28, 2011
Aaron R. Jex, et al.
Nature
Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques.
October 16, 2011
Guangmei Yan, et al.
Nature Biotechnology
Genome sequencing reveals insights into physiology and longevity of the naked mole rat.
October 12, 2011
Eun Bae Kim, et al.
Nature
Identification of PRRT2 as the causative gene of paroxysmal kinesigenic dyskinesias
October 4, 2011
Jun-Ling Wang, et al.
Brain
An aboriginal Australian genome reveals separate human dispersals into Asia.
September 22, 2011
Morten Rasmussen, et al.
Science
Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder.
August 7, 2011
Yaoting Guo, Guangwu Guo, et al.
Nature Genetics
The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line.
July 31, 2011
Xun Xu, Harish Nagarajan, et al.
Nature Biotechnology
Open-source genomic analysis of Shiga-Toxin producing E. coli O104:H4.
July 27, 2011
Holger Rohde, M. D., Junjie Qin, et al.
The New England Journal of Medicine
Structural variation in two human genomes mapped at single-nucleotide resolution by whole genome de novo assembly.
July 24, 2011
Yingrui Li, Hancheng Zheng, et al.
Nature Biotechnology
Identification of the hybrid strain responsible for Germany food-poisoning outbreak by polymerase chain reaction.
July 13, 2011
Yujun Cui, Junjie Qin, et al.
Journal of Clinical Microbiology
Genome sequence and analysis of the tuber crop potato.
July 10, 2011
The Potato Genome Sequencing Consortium
Nature
Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies.
July 6, 2011
Wang L, Sun J, Wu H, et al.
Elsevier
Genome sequence and global sequence variation map with 5.5 million SNPs in Chinese rhesus macaque.
July 6, 2011
Xiaodong Fang, Yanfeng Zhang, et al.
Genome Biology
The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming.
June 30, 2011
Sanne Nygarrd, Guojie Zhang, et al.
Genome Research
Estimation of allele frequency and association mapping using next-generation sequencing data.
June 11, 2011
Su Yeon Kim, Kirk E Lohmueller, et al.
BMC Bioinformatics
Exome sequencing identifies ZNF644 mutations in high myopia.
June 9, 2011
Yi Shi, Yingrui Li, et al.
PLoS Genetics
Genome-wide mapping of DNA methylation in chicken.
May 5, 2011
Qinghe Li, Ning Li, et al.
PLoS One
Confirmation by exome sequencing of the pathogenic role of NCSTN mutations in acne inversa (Hidradenitis Suppurativa).
March 24, 2011
Yuan Liu, Min Gao, et al.
Journal of Investigative Dermatology
TGM6 identified as a novel causative gene of spinocerebellar ataxias using exome sequencing
November 23, 2010
Jun Ling Wang,Xu Yang, et al.
Brain
Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection.
November 14, 2010
Hon-Ming Lam,Xun Xu, et al.
Nature Genetics
The DNA methylome of human peripheral blood mononuclear cells.
November 9, 2010
Yingrui Li, Jingde Zhu, et al.
PLoS Biology
Triangulation of the human, chimpanzee, and Neanderthal genome sequences identifies potentially compensated mutations.
November 9, 2010
Zhang G,Pei Z, et al.
Human Mutation
AHD 2.0: an update version of Arabidopsis Hormone Database for plant systematic studies.
November 2, 2010
Zhiqiang Jiang, Xiaochuan Liu, et al.
Nucleic Acids Research
Diversity of human copy number variation and multicopy Genes.
October 29, 2010
Peter H. Sudmant, Jacob O. Kitzman, et al.
Science
A map of human genome variation from population-scale sequencing.
October 27, 2010
The 1000 Genomes Project Consortium
Nature
Genome-wide patterns of genetic variation among elite maize inbred lines.
October 24, 2010
Lai J, Li R, et al.
Nature Genetics
Resequencing of 200 human exomes identifies an excess of low-frequency non-synonymous coding variants.
October 3, 2010
Li Y, Vinckenbosch N,et al.
Nature Genetics
Sequencing bias: comparison of different protocols of microRNA library construction.
September 6, 2010
Tian G, Yin X, et al.
BMC Biotechnology
Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator.
August 27, 2010
Roberto Bonasio, Guojie Zhang, et al.
Science
Sequencing of 50 human exomes reveals adaptation to high altitude.
July 2, 2010
Xin Yi, Yu Liang, et al.
Science
Design of association studies with pooled or un-pooled next-generation sequencing data.
June 15, 2010
Su Yeon Kim, Yingrui Li, et al.
Genetic Epidemiology
Single base-resolution methylome of the silkworm reveals a sparse epigenomic map.
May 2, 2010
Hui Xiang, Jingde Zhu, et al.
Nature Biotechnology
Power of Deep Sequencing and Agilent Microarray for Gene Expression Profiling Study
April 30, 2010
Lin Feng, Hang Liu, et al.
Molecular Biotechnology
Whole genome DNA methylation analysis based on high throughput sequencing technology
April 27, 2010
Ning Li, Mingzhi Ye, et al.
Methods
International network of cancer genome projects.
April 15, 2010
The International Cancer Genome Consortium
Nature
Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing.
April 14, 2010
Bin Wang, Guangwu Guo, et al.
Nucleic Acids Research
State of the art de novo assembly of human genomes from massively parallel sequencing data.
April 4, 2010
Yingrui Li, Yujie Hu, et al.
Human Genomics
Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome.
March 19, 2010
Guojie Zhang, Guangwu Guo, et al.
Genome Research
A human gut microbial gene catalogue established by metagenomic sequencing.
March 4, 2010
Junjie Qin, Ruiqiang Li, et al.
Nature
Ancient human genome sequence of an extinct Palaeo-Eskimo.
February 11, 2010
Rasmussen M, Li Y, et al.
Nature
De novo assembly of human genomes with massively parallel short read sequencing.
December 17, 2009
Li R, Zhu H, et al.
Genome Research
The sequence and de novo assembly of the giant panda genome.
December 13, 2009
Li R, Fan W, et al.
Nature
Building the sequence map of the human pan-genome.
December 7, 2009
Li R, Li Y, et al.
Nature Biotechnology
The genome of the cucumber, Cucumis sativus L.
November 1, 2009
Huang S, Li R, et al.
Nature Genetics
SilkDB v2.0: a platform for silkworm (Bombyx mori ) Genome Biologyogy.
September 30, 2009
Duan J, Li R, et al.
Nucleic Acids Research
Faster human genome sequencing.
September 1, 2009
Li Y, Wang J.
Nature Biotechnology
Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx).
August 27, 2009
Qingyou Xia , Yiran Guo, et al.
Science
Identification and characterization of novel amphioxus microRNAs by Solexa sequencing.
July 17, 2009
Chen X, Li Q, et al.
Genome Biology
SOAP2: an improved ultrafast tool for short read alignment.
June 3, 2009
Li R, Yu C, et al.
Bioinformatics
SNP detection for massively parallel whole-Genome Researchequencing.
May 6, 2009
Li R, Li Y, et al.
Genome Research
Correlation between Ka/Ks and Ks is related to substitution model and evolutionary lineage.
March 24, 2009
Li J, Zhang Z, et al.
Journal of Molecular Evolution
Counting of oligomers in sequences generated by markov chains for DNA motif discovery.
February 1, 2009
Shan G, Zheng WM.
Journal of Bioinformatics and Computational Biology
The genome of a lepidopteran model insect, the silkworm Bombyx mori.
December 12, 2008
International Silkworm Genome Consortium
Insect Biochemistry and Molecular Biology
Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds.
November 11, 2008
Muir WM, Wong GK, et al.
Proceedings of the National Academy of Sciences of the United States of America
The diploid genome sequence of an Asian individual.
November 6, 2008
Jun Wang, Wei Wang, et al.
Nature
Concept, design and implementation of a cardiovascular gene-centric 50 K SNP array for large-scale genomic association studies.
October 31, 2008
Brendan J. Keating, Sam Tischfield, et al
PLoS ONE
Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases.
September 2, 2008
Xi Chen, Yi Ba, et al
Cell Research
Mapping short DNA sequencing reads and calling variants using mapping quality scores.
August 19, 2008
Li H, Ruan J
Genome Research
Neo-sex chromosomes in the black muntjac recapitulate incipient evolution of mammalian sex chromosomes.
June 14, 2008
Qi Zhou, Jun Wang, et al
Genome Biology
On the origin of new genes in Drosophila.
June 11, 2008
Qi Zhou, Guojie Zhang, et al.
Genome Research
Positive correlation between recombination rate and nucleotide diversity is shown under domestication selection in the chicken genome.
March 27, 2008
L. F, J. Y, et al.
Chinese Science Bulletin
Analysis of 142 genes resolves the rapid diversification of the rice genus.
March 3, 2008
Zou XH, Zhang FM, et al.
Genome Biology
Gene conversion in the rice genome.
February 25, 2008
Xu S, Clark T, et al.
BMC Genomics
Complete genome sequence of the mosquitocidal bacterium Bacillus sphaericus C3-41 and comparison with those of closely related Bacillus species.
February 22, 2008
Xiaomin Hu, Wei Fan, et al.
Journal of Bacteriology
SOAP: short oligonucleotide alignment program.
January 28, 2008
Li R, Li Y, et al.
Bioinformatics
TreeFam: 2008 Update.
December 1, 2007
Ruan J, Li H, et al.
Nucleic Acids Research
Evolution of genes and genomes on the Drosophila phylogeny.
November 8, 2007
Clark, A. G., Eisen, M. B., et al.
Nature
A cross-species alignment tool (CAT).
September 19, 2007
Li H, Guan L, et al.
BMC Bioinformatics
FGF: a web tool for Fishing Gene Family in a whole genome database.
June 21, 2007
Zheng H, Shi J, et al.
Nucleic Acids Research
Identification and characterization of insect-specific proteins by genome data analysis.
April 4, 2007
Zhang G, Wang H, et al.
BMC Genomics
A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates.
March 21, 2007
Chen C, Tang J, et al.
PLoS ONE
Detecting positive darwinian selection in brain-expressed genes during human evolution.
February 7, 2007
Qi X, Yang S, et al.
Chinese Science Bulletin
Plant bioinformatics: methods and protocols (methods in Molecular Biology).(Chapter 13).
February 1, 2007
Ximiao He, Jun Wang
Humana Press
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags.
February 1, 2007
Gorodkin J, Cirera S, et al.
Genome Biology
Rapid evolution in a pair of recent duplicate segments of rice.
January 15, 2007
Jiang H, Liu D, et al.
Journal of Experimental Zoology, Part B, Molecular and Development Evolution
Snap: an integrated SNP annotation platform.
November 29, 2006
Li S, Ma L, et al.
PigGIS: Pig Genomic Informatics System.
November 7, 2006
Ruan J, Guo Y, et al.
Nucleic Acids Research
MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes.
November 7, 2006
Zhang Y, Zhang Y, et al.
Nucleic Acids Research
KaKs_Calculator: calculating Ka and Ks through model selection and model averaging.
November 1, 2006
Zhang Z, Li J, et al.
Genomics Proteomics Bioinformatics
Evaluation of six methods for estimating synonymous and nonsynonymous substitution rates.
August 1, 2006
Zhang Z, Yu J.
Genomics Proteomics Bioinformatics
Detecting lineage-specific adaptive evolution of brain-expressed genes in human using rhesus macaque as outgroup.
July 18, 2006
Yu XJ, Zheng HK, et al.
Genomics
Comparing the whole-genome-shotgun and map-based sequences of the rice genome.
July 13, 2006
Yu J, Ni P, et al.
Trends in Plant Science
Genomic comparison of Yersinia pestis and Yersinia pseudotuberculosis by combination of suppression subtractive hybridization and DNA microarray.
July 11, 2006
Wang X, Zhou D, et al.
Archives of Microbiology
High rate of chimeric gene origination by retroposition in plant genomes.
July 7, 2006
Wang W, Zheng H, et al.
Plant Cell
WEGO: a web tool for plotting GO annotations.
July 1, 2006
Ye J, Fang L, et al.
Nucleic Acids Research
Comparative genomic analysis links karyotypic evolution with genomic evolution in the Indian Muntjac (Muntiacus muntjak vaginalis).
June 22, 2006
Zhou Q, Huang L, et al.
Chromosoma
Computing Ka and Ks with a consideration of unequal transitional substitutions.
June 2, 2006
Zhang Z, Li J, et al.
BMC Evolutionary Biology
The complete mitochondrial genome of the helmet catfish Cranoglanis bouderius (Siluriformes: Cranoglanididae) and the phylogeny of otophysan fishes.
May 3, 2006
Peng Z, Wang J, et al.
Gene
The DNA sequence, annotation and analysis of human chromosome 3.
April 27, 2006
Muzny DM, Scherer SE, et al
Nature
A mammalian organelle map by protein correlation profiling.
April 6, 2006
Foster LJ, de Hoog CL, et al.
Cell
Mitochondrial molecular clocks and the origin of the major Otocephalan clades (Pisces: Teleostei): A new insight.
February 14, 2006
Peng Z, He S, et al.
Gene
TreeFam: a curated database of phylogenetic trees of animal gene families.
January 1, 2006
Li H, Coghlan A, et al.
Nucleic Acids Research
Genome-wide transcription analyses in rice using tiling microarrays.
December 20, 2005
Li L, Wang X, et al.
Nature Genetics
ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun.
September 1, 2005
Li R, Ye J, et al.
PLoS Computational Biology
A microarray analysis of the rice transcriptome and its comparison to Arabidopsis.
September 1, 2005
Ma L, Chen C, et al.
Genome Research
A pilot study of transcription unit analysis in rice using oligonucleotide tiling-path microarray.
September 1, 2005
Stolc V, Li L, et al.
Plant Molecular Biology
Origin and evolution of new exons in rodents.
August 18, 2005
Wang W, Zheng H, et al.
Genome Research
Serial analysis of gene expression study of a hybrid rice strain (LYP9) and its parental cultivars.
July 7, 2005
Bao J, Lee S, et al
Plant Physiology
Test data sets and evaluation of gene prediction programs on the rice genome.
July 7, 2005
Li H, Liu J, et al.
Journal of Computational Science and Technology
Detecting novel low-abundant transcripts in Drosophila.
June 7, 2005
Lee S, Bao J, et al.
RNA
Origin and evolution of new exons in the rodent zinc finger protein 39 gene.
June 1, 2005
Peng L, Zheng H, et al.
Chinese Science Bulletin
Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture.
May 27, 2005
Li L, Wang X, et al.
Genome Biology
Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing.
May 10, 2005
Wernersson R, Schierup MH, et al.
BMC Genomics
Accelerated evolution of the pituitary adenylate cyclase-activating polypeptide precursor gene during human origin.
April 16, 2005
Wang YQ, Qian YP, et al.
Genetics
Pseudogene accumulation might promote the adaptive microevolution of Yersinia pestis.
March 1, 2005
Tong Z, Zhou D, et al.
Journal of Medical Microbiology
Genetic variations in the pgm locus among natural isolates of Yersinia pestis.
February 1, 2005
Tong ZZ, Zhou DS, Song YJ, et al.
The Journal of General and Applied Microbiology
A mitochondrial genome sequence of the Tibetan antelope (Pantholops hodgsonii).
February 1, 2005
Xu SQ, Yang YZ, et al.
Genomics Proteomics Bioinformatics
The Genomes of Oryza sativa: a history of duplications.
February 1, 2005
Yu J, Wang J, et al.
PLoS Biology
ChickVD: a sequence variation database for the chicken genome.
January 1, 2005
Wang J, He X, et al.
Nucleic Acids Research
SilkDB: a knowledgebase for silkworm biology and genomics.
January 1, 2005
Wang J, Xia Q, et al.
Nucleic Acids Research
A draft sequence for the genome of the domesticated silkworm (Bombyx mori).
December 10, 2004
Xia Q, Zhou Z, et al.
Science
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution.
December 9, 2004
Hillier LW, Miller W, et al
Nature
The analysis of large-scale gene expression correlated to the phase changes of the migratory locust.
December 9, 2004
Kang L, Chen X, et al.
Proceedings of the National Academy of Sciences of the United States of America
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms.
December 9, 2004
Wong GK, Liu B, et al.
Nature
Finishing the euchromatic sequence of the human genome.
October 21, 2004
International Human Genome Sequencing Consortium
Nature
Mouse transcriptome: neutral evolution of non-coding complementary DNAs.
October 14, 2004
Wang J, Zhang J, et al.
Nature
DNA microarray analysis of genome dynamics in Yersinia pestis: insights into bacterial genome microevolution and niche adaptation.
August 7, 2004
Zhou D, Han Y, et al.
Journal of Bacteriology
Detailed comparison between the wheat chromosome group 7 short arms and the rice chromosome arms 6S and 8L with special reference to genes involved in starch biosynthesis.
August 6, 2004
Li Z, Huang B, et al.
Functional and Integrative Genomics
Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus.
August 1, 2004
Zhou D, Tong Z, et al.
Journal of Bacteriology
Complete nucleotide sequence and organization of the naphthalene catabolic plasmid pND6-1 from Pseudomonas sp. strain ND6. 
July 21, 2004
Li W, Shi J, et al.
Gene
Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans.
June 30, 2004
Song Y, Tong Z, et al.
DNA Research
Structure-based preliminary analysis of immunity and virulence of SARS coronavirus.
June 1, 2004
Li Y, Luo C, et al.
ViralImmunology
A comparison of rice chloroplast genomes.
March 30, 2004
Tang J, Xia H, et al.
Plant Physiology
Genes controlling seed dormancy and pre-harvest sprouting in a rice-wheat-barley comparison.
February 10, 2004
Li C, Ni P, et al.
Functional and Integrative Genomics
Analyzing the biology on the system level.
February 1, 2004
Tong W.
Genomics Proteomics Bioinformatics
BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics.
January 1, 2004
Zhao W, Wang J, et al.
Nucleic Acids Research
The International HapMap Project.
December 18, 2003
International HapMap Consortium
Nature
Characterization of soybean genomic features by analysis of its expressed sequence tags.
November 18, 2003
Tian AG, Wang J, et al.
Theoretical and Applied Genetics
Vertebrate gene predictions and the problem of large genes.
September 7, 2003
Wang J, Li S, et al.
Nature Reviews Genetics
A strategy for searching antigenic regions in the SARS-CoV spike protein.
August 1, 2003
Ren Y, Zhou Z, et al.
Genomics Proteomics Bioinformatics
Integration of G-protein coupled receptor signaling pathways for activation of a transcription factor (EGR-3).
August 1, 2003
Tan X, Sanders P, et al.
Genomics Proteomics Bioinformatics
A population threshold for functional polymorphisms.
August 1, 2003
Wong GK, Yang Z, et al.
Genome Research
Genome organization of the SARS-CoV.
August 1, 2003
Xu J, Hu J, et al.
Genomics Proteomics Bioinformatics
OsSET1, a novel SET-domain-containing gene from rice.
June 18, 2003
Liang YK, Wang Y, et al.
Journal of Experimental Botany
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